SBRML- A Markup Language for Encoding Systems Biology Results
نویسندگان
چکیده
منابع مشابه
SBRML: a markup language for associating systems biology data with models
MOTIVATION Research in systems biology is carried out through a combination of experiments and models. Several data standards have been adopted for representing models (Systems Biology Markup Language) and various types of relevant experimental data (such as FuGE and those of the Proteomics Standards Initiative). However, until now, there has been no standard way to associate a model and its en...
متن کاملSystems Biology Markup Language (SBML)
models and tacit rule-based models have long been used in product development and safety testing in various engineering disciplines, such as aerospace engineering and electronic circuit design. It can be envisaged that predictive approaches is expected to increase significantly in the coming years in drug discovery too. The extent of omics-scale data and the advances in systems technologies to ...
متن کاملMIME Media Type for the Systems Biology Markup Language (SBML)
Status of this Memo This memo provides information for the Internet community. It does not specify an Internet standard of any kind. Distribution of this memo is unlimited. Abstract This document registers the MIME sub-type application/sbml+xml, a media type for SBML, the Systems Biology Markup Language. SBML is defined by The SBML Team at the California Institute of Technology and interested m...
متن کاملSystems biology markup language: Level 2 and beyond.
The SBML (systems biology markup language) is a standard exchange format for computational models of biochemical networks. We continue developing SBML collaboratively with the modelling community to meet their evolving needs. The recently introduced SBML Level 2 includes several enhancements to the original Level 1, and features under development for SBML Level 3 include model composition, mult...
متن کاملTranslation of Systems Biology Markup Language into Process Algebra
We address the automatic translation of Systems Biology Mark-Up Language (SBML) models of network of biochemical reactions into the Biochemical Stochastic π-calculus. SBML is XML-based widespread exchange language for systems biology. The Biochemical Stochastic π-calculus can describe the concurrency of a network of biochemical reactions. Available tools allow to simulate π-calculus models to o...
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ژورنال
عنوان ژورنال: Nature Precedings
سال: 2011
ISSN: 1756-0357
DOI: 10.1038/npre.2011.6351.1